Browse of TCMCG007C13000 protein

CDS

Accession Number	TCMCG007C13000
gbkey	CDS
Protein Id	XP_009127757.1
Location	join(11042198..11042221,11042407..11042493,11042584..11042673,11042826..11042906,11043091..11043255,11043334..11045406,11045492..11045638,11045705..11045997,11046126..11046216)
Gene	LOC103852607
GeneID	103852607
Organism	Brassica rapa

Protein

Length	1016aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009129509.3
Definition	PH, RCC1 and FYVE domains-containing protein 1 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	U
Description	endoplasmic reticulum tubular network membrane organization
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	R05196        [VIEW IN KEGG]
KEGG_rclass	RC00049        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko04147        [VIEW IN KEGG]
KEGG_ko	ko:K00705        [VIEW IN KEGG] ko:K17279        [VIEW IN KEGG]
EC	2.4.1.25        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00500        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] map00500        [VIEW IN KEGG] map01100        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006970        [VIEW IN EMBL-EBI] GO:0006972        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009414        [VIEW IN EMBL-EBI] GO:0009415        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009651        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009737        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0010035        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0033993        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0042538        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0097305        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTGAGAGAGACGTCGAACAGGCCATTACGTCACTTAAGAAAGGTTCCTACTTGCTGAAATACGGTCGCAGGGGGAAGCCTAAGTTCTGTCCATTCCAGCTTACAAGTGACGAGTCAACATTAGTATGGTACTCTGGCAAAGAAGAGAAGCAGATTAAGCTTAGTCAAGTCCTCAGAATTGTTCCTGGACAACGCACGGCTACATTCAAGAGATATCCACGGCCGGAGAAAGAGTATCAGTCCTTTTCCCTCATATGTCCTGATAGGTCCTTGGATTTGATATGTAAAGACAAGGACGAAGCAGAAGTGTGGGTTGTTGGTTTGAAGGCACTGATCACTCGTGTAAAAATCTCCAAATGGAAAAACACTATTAAACCTGAGATCACTTCACCAGAATGTCCAACACCTCAAGCACGAAGAGTGTCTCCATTCGTATCAATCCTTGATCAAGTTACTCAGCCCTCTACCGAGACTTCTACACCAAACCGTTTAGGAAAAGTCTTTTCCGACATTGTCTCAATAACTGCACCAGCCAATAACAATCAGACAGAAGCCAATACTCTCAATCCCAACCTATACTGTCCTATTTCTCCTGGTAATGTGGAAAACCCGAATTCACGGTTCTCCACCGGGGGTGACCTGGCTAGACTCAGCCTATCTAGCGCTGTGAGTACATCTAGCCATGGTTCGTATCACGAAGAGTTTGATGCTTTAGGTGATGTTTTCCTCTGGGGTGAAGCTATAAGTGACGGTGTACTAAGTGGTACTGGAAAGACATTACATTCCACTACAGAGGATGCACTTTTACCTAAAACATTAGAGTCCACAATAGTTCTCGATGCTCAAAACATAGCATGTGGTAGGTGTCATGCTGTTTTAGTTACAAAACAAGGAGAGATCTTCAGCTGGGGAGAGGGAACAGGTGGGAAACTAGGACATGGCTTAGAAAAAGATACTCACCAACCAAAGTTCATTAGTAGTGTCAGAGGGATGAATTTCAAATCTTTAGCCTGTGGTGAATTTCATACATGTGCTGTTACTCAATCTGGTGATCTTTATACTTGGGGTGACGGCACTCGAAATGTCGATTTGCTTGGTCATGGGAGTGAATCCAGCTGCTGGATTCCCAAGAGGGTGACTGGTGTCTTACAAGGAATGCATGTGTCTTATGTGGCTTGTGGTCCTTGGCATACAGCAGTGGTTGCATCATCAGGACAGTTGTTTACATTTGGAGACGGATGTTTTGGTGCACTAGGTCATGGAGACAGAACAAGCTCTAGTGTTCCGCGCGTAGTTGAAAGCCTAAGTGAAGTAAGAGTAATGAAGGTTGCTTGTGGATTTTGGCATACAGCTGCAGTGGTGGAGGTTACAAATGAAGCATCTGATGCAGAGCTCTACTCTTCGTGTGGACAACTGTTCACATGGGGAGATGGTGAGAAAGGCCAGCTTGGTCATGGTGACAATTCGGCAAAGCTACTCCCTGAGTGTGTAACCTCATTGACAGATGAAAACATCTGCCAAGTTGCTTGTGGACATAGTCTCACTGTCTCTCTTACATCCAATGGACATGTGTATACAATGGGTAGCCCGGCTTACGGCCAGCTGGGCAACCCTACGGCCAAGGAGAAGGTCCCTTCACGCGTCGAAGGAGACATAGCAGAGACTTGTGTAGAGGAGATTGCGTGTGGTTCTCATCATGTGGCTGTGTTGACATCTAAATCAGAGGTTTACACTTGGGGAAAAGGATTAAATGGTCAGTTAGGACACGGAACCGTTGAGAACAAAAGAGAACCTGCTGTTGTTGGGTTTTTGAAAGAAAAACAAGTCAAGGCTATAACATGTGGCTCCAACTTCACTGCTGTGATTTGTCTTAACAAATGGGTACCTGGCTCTGAACATTCTCTCTGTGCTGGTTGCCGTAACCCTTTCAATTTTAGAAGAAAACGTCACAATTGTTACAACTGTGGTCTCATCTTTTGTAAAGTATGCAGCAGTAGAAAGTCTTTGAGAGCTGCTCTTGCGCCTGATATGAACAAACCATATAGAGTGTGTTATGGATGTTTTACCAAGCTGAAAAGGTCTAGAGAACTGTCTCCTCCTCCTCCTACTCCACGTACAAGAAACCTTTTGAATATGCGAAAATCGACCGATGTTTCAGAAAAAACTCCAAAACTCCTCTCACCACACTCCAGAATAGCCTCGGCTGACTCTTTAGTGCAATATGGCGAAGGAAGACACAGCAAAAGAGACGTGAAACCGGAAGTAAGTAACAGTAATGTCTTCGCCTTAGGCAGTGTACAGCCAGCTATGTCGCCGTTATTAAGAGGATCAATAGCTTGGCCTAGAATCTCCAAAAATATGATAGTTAAAGTTCCTGGTTCAAGAGTTAGCTCTCGCACAGCGTCTCCTGTTTCAGTGAAGTCAACTAGTCCACGCCCATCTCATGAAGTAACAACTGATGAATCTAAACACATAAAAGACAGTTTTGGTCAAGAAATTGTGGGTCTAAAGGAACATGTAGAACAACTTACTTCCAAAACACAACAACTTGAAGAAGAACTTGAAAAAACTAAAAGGCAGTTGAAAGTGGTCACTGCGATGGCAGCAGATGAAGCAGAGGAAAACAGATCCGCAAAAGAGGTTATTAGATCTCTAACCACTCAGTTGAAGGAAATGTCTGGAAGAGTACCTCAAAAGGATGATACTAGCACTAACTTAAGACACACTGAAAAAGAGACAACATTAGAGAGTCAAACTCAGACTAGTTCCCAGACACATATAAGAAGTATGGTCCCTCATGATAGTCAATCAGAAAACAACTTAAGTAAGAGTTTTGTTAATGGACATAGAAGACATAATGAGAAGGCAGAGAGAGTTGTGCAAGACGAACCTGGAGTTTATTTGACACTGTTGTCTTTACCTGGTGGTGGTAATGAACTCAAGCGTGTCCGGTTCAGCCGGAAACAGTTTACTGAAGAACAAGCAGAGAAGTGGTGGGGTGAAAATGGAGGTAAAGCTTGTGAGCGACACAACATTCTAGTTTCCTAG

Protein:   MAERDVEQAITSLKKGSYLLKYGRRGKPKFCPFQLTSDESTLVWYSGKEEKQIKLSQVLRIVPGQRTATFKRYPRPEKEYQSFSLICPDRSLDLICKDKDEAEVWVVGLKALITRVKISKWKNTIKPEITSPECPTPQARRVSPFVSILDQVTQPSTETSTPNRLGKVFSDIVSITAPANNNQTEANTLNPNLYCPISPGNVENPNSRFSTGGDLARLSLSSAVSTSSHGSYHEEFDALGDVFLWGEAISDGVLSGTGKTLHSTTEDALLPKTLESTIVLDAQNIACGRCHAVLVTKQGEIFSWGEGTGGKLGHGLEKDTHQPKFISSVRGMNFKSLACGEFHTCAVTQSGDLYTWGDGTRNVDLLGHGSESSCWIPKRVTGVLQGMHVSYVACGPWHTAVVASSGQLFTFGDGCFGALGHGDRTSSSVPRVVESLSEVRVMKVACGFWHTAAVVEVTNEASDAELYSSCGQLFTWGDGEKGQLGHGDNSAKLLPECVTSLTDENICQVACGHSLTVSLTSNGHVYTMGSPAYGQLGNPTAKEKVPSRVEGDIAETCVEEIACGSHHVAVLTSKSEVYTWGKGLNGQLGHGTVENKREPAVVGFLKEKQVKAITCGSNFTAVICLNKWVPGSEHSLCAGCRNPFNFRRKRHNCYNCGLIFCKVCSSRKSLRAALAPDMNKPYRVCYGCFTKLKRSRELSPPPPTPRTRNLLNMRKSTDVSEKTPKLLSPHSRIASADSLVQYGEGRHSKRDVKPEVSNSNVFALGSVQPAMSPLLRGSIAWPRISKNMIVKVPGSRVSSRTASPVSVKSTSPRPSHEVTTDESKHIKDSFGQEIVGLKEHVEQLTSKTQQLEEELEKTKRQLKVVTAMAADEAEENRSAKEVIRSLTTQLKEMSGRVPQKDDTSTNLRHTEKETTLESQTQTSSQTHIRSMVPHDSQSENNLSKSFVNGHRRHNEKAERVVQDEPGVYLTLLSLPGGGNELKRVRFSRKQFTEEQAEKWWGENGGKACERHNILVS